BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D08LP1|AL430534
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1398 1340 0.0
3x_Contig1458 133 6e-31
>3x_Contig1398
Length = 9161
Score = 1340 bits (674), Expect = 0.0
Identities = 707/718 (98%), Gaps = 2/718 (0%)
Strand = Plus / Minus
Query: 268 aagttgagcattagtaaaagcatcgactaattgcyaagaaactaataaggtaagtcatat 327
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 9161 aagttgagcattagtaaaagcatcgactaattgctaagaaacttataaggtaagtaatat 9102
Query: 328 atttcacatagtccatctatgagaacatatccgacggcttcaagaaactatggctaataa 387
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9101 atttcacatagtccatctatgagaacatatcggacggcttcaagaaactatggctaataa 9042
Query: 388 aagaaggccaaagaaagtaaagcctccttatagaaaayatgttggcggtgttggattcac 447
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 9041 aagaaggccaaagaaagtaaagcctccttatagaaaatatgttggcggtgttggattcac 8982
Query: 448 acacactcaagggttcagtcaaatagctgaagaaaatgacacaacgaatatccaaaagtt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8981 acacactcaagggttcagtcaaatagctgaagaaaatgacacaacgaatatccaaaagtt 8922
Query: 508 taatgaattacaaataaacgaaatacgtaatccttctgatagcgaggaatcacgactaca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8921 taatgaattacaaataaacgaaatacgtaatccttctgatagcgaggaatcacgactaca 8862
Query: 568 gggagattctgtccgatcagatgtcactgattacgcgtggtatgaagcttccactagaaa 627
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 8861 gggagattctgtccgatcagatgtaactgattacg-gtggtatgaagcttccactagaaa 8803
Query: 628 tatttgaccttacgatttctatgatgagtccgccagatatcaggatgaacttagtgctag 687
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8802 tatttgaccttacgatttctatgatgagtccgcaagatatcaggatgaacttagtgctag 8743
Query: 688 tgtgtcgagcatggtatcttatatgcataccaaaattatatcgtacaccaaagttaacta 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8742 tgtgtcgagcatggtatcttatatgcataccaaaattatatcgtacaccaaagttaacta 8683
Query: 748 gtcgaaactttttaaagtttgtggaaacggtattggcagataggaagagaaaaacatgtg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8682 gtcgaaactttttaaagtttgtggaaacggtattggcagataggaagagaaaaacatgtg 8623
Query: 808 agcmcgtagttcattttggatttatctcctattatacagagtgggaagaatagctatgtg 867
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8622 agcacgtagttca-tttggatttatctcctattatacagagtgggaagaatagctatgtg 8564
Query: 868 tcaaaagtgctacgacgttgctctaaaaatttggkttcatttacagcgccacagactagt 927
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8563 tcaaaagtgctacgacgttgctctaaaaatttggtttcatttacagcgccacagactagt 8504
Query: 928 tttggaatagctcctttgatcagtcttaaatcctgccaaaaccttaaataccttgatt 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8503 tttggaatagctcctttgatcagtcttaaatcctgccaaaaccttaaataccttgatt 8446
>3x_Contig1458
Length = 9817
Score = 133 bits (67), Expect = 6e-31
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 9 aacatacaattgctgactttttaagattctactcataaatgtcaacaacacacataggta 68
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 9733 aacatacaattgctgactttnta-gattctactcataaatgtcaacaacacacataggta 9791
Query: 69 aacaagaaaggtaaggtcataaaata 94
||||||||||| |||||||||||||
Sbjct: 9792 aacaagaaagggtaggtcataaaata 9817
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6613
Number of Sequences: 1807
Number of extensions: 6613
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)